We have many TrueNAS units deployed and they've served us well everywhere. Our most common use case is using it as storage backing for virtual machines. We have Proxmox talking to it, as well as having it acting as the hypervisor. We've never lost data with it, even when faced with multiple disk failures. We've also always found the performance to be robust and able to handle the needs of our clients. Our clients range from libraries, to medium sized enterprises and we've always been able to make it work, and work reliably.
If you have one user or 1000's of users (especially using Windows), Windows Server is a no-brainer! The only reason I would suggest going with a Linux server is if you have old hardware (Windows Server is more process intensive than Linux). But, Linux is open-source, so anyone can publish updates/security updates, but on the flip side, malicious people also have full access to Linux's codebase allowing for much easier writing of exploitations/viruses/malware/ransomware.
User and device management out of the box. Active directory is a proven system for doing this and works just as well as it always has.
ADFS providing integration into many third-party applications using SAML authentication. We use this heavily to make user experience as simple and straightforward as we can.
Local DHCP. It's another one of these systems that is very easy to setup and use out of the box and requires very little maintenance, if any. The system is almost unchanged throughout the years and so anyone with server experience can manage it.
Windows Server is extremely complex, and while newer versions have eased the initial setup process, setting up a server is still a very time consuming and difficult task.
The complexity of Windows Server also makes troubleshooting any problems that arise extremely difficult, both in tracking down the actual issue and then resolving the issue. Often times a problem can manifest itself in more than one way, making searching for the specific problem also difficult.
Windows Server is also very expensive, with complex and confusing licensing terms. In fact, Microsoft provides a 32-page PDF guide on Windows Server licensing, which is in and of itself dense and confusing to follow. To make matters more complicated, there multiple different version of Windows Server itself - Nano, Essentials, Standard and Datacenter edition, and each edition has different licensing terms. Licensing terms include items such as the physical processor's cores of the server, how many users will be accessing the server (called a CAL - client access license), and a plethora of other items.
Microsoft's support for Windows Server can be extremely frustrating at times. While Microsoft hosts a very active user forum, Microsoft employees who frequent those forums often provide only stock answers to questions (without actually reading the details) or no answers at all. For more in-depth - phone support can be quite expensive.
Upgrading a Windows Server from one major version to another (i.e. 2012 to 2016) is a frustratingly complex and dangerous procedure, as many things can go wrong during the upgrading, essentially breaking the entire setup. In fact, Microsoft doesn't even suggest doing an in-place upgrade, but to perform a backup of the existing server, doing a clean install of the new version, and migrating the information from the older version to the new version. In general, it is not even recommended to upgrade from one version to another as the risk significantly outweigh the benefits.
The software has been amazing. It has saved me a lot of headache in the past few years. Also, it's nice to knowing that if any of our current Synology devices were to die I can have an iSCSI system up and running very shortly. I didn't give a 10 score because I find their support to be rather slow and pedantic. They test many things when the answer is right in front of them. The compute sytem (not storage) we purchased from them came with pcie gen4 nvme's. They didn't work, but rather than believe me about the spec's in the motherboard manual saying the onboard was pcie3 ONLY they shipped me 2 replacements until I showed them an old pcie3 device worked just fine. The part that rather frustrated me was the machine was claimed to have been tested / burnt in. How can this be true if the server won't even boot up into the BIOS?
I've carefully reviewed the servers and services currently running on Windows Server 2012, and given the opportunity would renew them as is going forward. There are two systems I currently have in place, one is a very large Linux implementation for a large ecommerce site, and one is a very large backup solution front ended by FTP servers running Linux. Neither are well suited for Windows, but the overall network infrastructure is and will be Windows Server for the foreseeable future.
The software is fairly straight forward and if you mess up the network interfaces you can login locally at the console and fix any issues that you may have had with VLANS etc denying you network access. There was a little bit of annoying issues when setting up multiple network interface cards. Rather than keeping one interface setup with DHCP, when you add a second one with a new network it disables the first. Which makes it impossible to login again. However if you wait it will revert. I learned after works that you need to set up the network cards and then go back and setup the first one again and THEN test / apply. After that it was pretty good. The summary of the devices is very nice to. You get an accurate snapshot of how well your system is doing as soon as you login
Everything can (and should) be done through the easy to use/navigate GUI. There is no need for archaic command prompt use to administer the server. But, it is there if you have very specific needs for batch files, etc. that are not covered in the all extensive GUI.
The support was responsive for opening cases. However I found solutions to simple problems took far too long. When we had a bad power supply and we had another with the exact same firmware version they should have sent replacement for both. We had to file another case for the other PSU that started dyeing the same week. They also had to do a lot of troubleshooting to replace the fans that were not behaving as they should. I'm not a home user. I know when certain things are failing and the silly hoops the jump through made it frustrating. However, once we finally got the problem identified we had parts shipped out via advance replacement which was nice.
It has been my experience that unless there is a flaw or bug with Microsoft Windows Server, you will have to pay extra for support beyond the support web site. That said, unofficial support on the thousands of technical websites makes self-help support readily available to any technician with an internet connection. Microsoft's support website is also fairly robust, but I find using a popular search engine often returns knowledgebase articles more quickly that Microsoft's search.
The implementation went well after we got the boot drive working properly. The device was setup exactly as i asked with the hardware except for the boot drive. The reason I chose 9 instead of 10 was the boot drive put us back about a week for the part to arrive. I ended up using a personal drive to show them that they were wrong sending use the gen4 drives.
Make sure that you have detailed processes in place for every server instance you plan to install/upgrade, if possible get the base OS loaded and Windows Updates applied ahead of time, and if using a VM take a snapshot prior to installing each role, as well as along the way.
I chose TrueNAS (upgrading from FreeNAS) because of the small footprint, ease of use, and reliability of the ZFS file system. The file sharing protocols supported as well as the intuitive interface all make TrueNAS a great choice for business and hobbyists alike.
Windows Server is more cost-effective and skills are easier to find to support the products. The deployment and management of the product can be automated with Microsoft SCCM. In my opinion, Linux seems to be more secured but takes more time and effort to learn than Windows Server. However, there are more Windows Server skills available in the job market.
Using a TruNAS integrated solution has reduced support overhead compared to using custom hardware.
Being cheaper than full flash storage arrays, this unit allows for a good balance of speed with its use of SSD-based caching drives.
The reliability of the hardware/software integration means I spend less time troubleshooting and more time doing business. Coming from a custom-built solution it is apparent that IX Systems has done some extensive testing.